JULY 2021

Dasgupta S, Dunham CL, Truong L, Simonich MT, Sullivan CM, Tanguay RL. Phenotypically Anchored mRNA and miRNA Expression Profiling in Zebrafish Reveals Flame Retardant Chemical Toxicity Networks. Front Cell Dev Biol. 2021;9:663032. doi: 10.3389/fcell.2021.663032. PubMed PMID: 33898466; PMCID: PMC8063052.Dasgupta S, Dunham CL, Truong L, Simonich MT, Sullivan CM, Tanguay RL. Phenotypically Anchored mRNA and miRNA Expression Profiling in Zebrafish Reveals Flame Retardant Chemical Toxicity Networks. Front Cell Dev Biol. 2021;9:663032. doi: 10.3389/fcell.2021.663032. PubMed PMID: 33898466; PMCID: PMC8063052.

Gamble JT, Elson DJ, Greenwood JA, Tanguay RL, Kolluri SK. The Zebrafish Xenograft Models for Investigating Cancer and Cancer Therapeutics. Biology (Basel). 2021;10(4). doi: 10.3390/biology10040252. PubMed PMID: 33804830.

Head B, Ramsey SA, Kioussi C, Tanguay RL, Traber MG. Vitamin E Deficiency Disrupts Gene Expression Networks during Zebrafish Development. Nutrients. 2021;13(2). doi: 10.3390/nu13020468. PubMed PMID: 33573233.

Keller RM, Beaver LM, Reardon PN, Prater MC, Truong L, Robinson MM, Tanguay RL, Stevens JF, Hord NG. Nitrate-induced improvements in exercise performance are coincident with exuberant changes in metabolic genes and the metabolome in zebrafish skeletal muscle. J Appl Physiol (1985). 2021. doi: 10.1152/japplphysiol.00185.2021. PubMed PMID: 34043471.

Manchanda A, Bonventre JA, Bugel SM, Chatterjee P, Tanguay R, Johnson CP. Truncation of the otoferlin transmembrane domain alters the development of hair cells and reduces membrane docking. Mol Biol Cell. 2021:mbcE20100657. doi: 10.1091/mbc.E20-10-0657. PubMed PMID: 33979209.

Rericha Y, Cao D, Truong L, Simonich M, Field JA, Tanguay RL. Behavior Effects of Structurally Diverse Per- and Polyfluoroalkyl Substances in Zebrafish. Chem Res Toxicol. 2021. doi: 10.1021/acs.chemrestox.1c00101. PubMed PMID: 34018735.

Shankar P, Dashner-Titus EJ, Truong L, Hayward K, Hudson LG, Tanguay RL. Developmental toxicity in zebrafish (Danio rerio) exposed to uranium: A comparison with lead, cadmium, and iron. Environ Pollut. 2021;269:116097. doi: 10.1016/j.envpol.2020.116097. PubMed PMID: 33246768; PMCID: PMC7785642.

To KT, St Mary L, Wooley AH, Wilbanks MS, Bednar AJ, Perkins EJ, Truong L, Tanguay RL, Garcia-Reyero N. Morphological and Behavioral Effects in Zebrafish Embryos after Exposure to Smoke Dyes. Toxics. 2021;9(1). doi: 10.3390/toxics9010009. PubMed PMID: 33435144.

Watt AT, Head B, Leonard SW, Tanguay RL, Traber MG. Gene Expression of CRAL_TRIO Family Proteins modulated by Vitamin E Deficiency in Zebrafish (Danio Rerio). J Nutr Biochem. 2021:108801. doi: 10.1016/j.jnutbio.2021.108801. PubMed PMID: 34119630.

Zhang J, Head B, Leonard SW, Choi J, Tanguay RL, Traber MG. Vitamin E deficiency dysregulates thiols, amino acids and related molecules during zebrafish embryogenesis. Redox Biol. 2021;38:101784. Epub 2020/11/14. doi: 10.1016/j.redox.2020.101784. PubMed PMID: 33186843; PMCID: PMC7658488.

Brian Head, Jane La Du, Carrie Barton, Jie Zhang, Carmen Wong, Emily Ho, Robyn L. Tanguay, Maret G. Traber. RedEfish: generation of the polycistronic mScarlet:GSG-T2A:Ttpa zebrafish line. In Press Antioxidants.

Preethi Thunga, Lisa Truong, Robyn L. Tanguay, David M. Reif. Concurrent evaluation of mortality and behavioral responses: A fast and efficient testing approach for high-throughput chemical hazard identification. In Press Frontiers Toxicology.

Adrian J. Green, Martin Mohlenkamp, Jhuma Das, Meenal Chaudhari, Lisa Truong, Robyn L. Tanguay, David M. Reif. Leveraging high-throughput screening data, deep neural networks, and conditional generative adversarial networks to advance predictive toxicology. In Press PLOS Computational Biology.

Turco AE, Oakes SR, Stietz KPK, Dunham CL, Joseph DB, Chathurvedula TS, Girardi NM, Schneider AJ, Gawdzik J, Sheftel CM, Wang P, Wang Z, Bjorling DE, Ricke WA, Tang W, Hernandez LL, Keast JR, Bonev AD, Grimes MD, Strand DW, Tykocki NR, Tanguay RL, Peterson RE, Vezina CM. A neuroanatomical mechanism linking perinatal TCDD exposure to lower urinary tract dysfunction in adulthood. Dis Model Mech. 2021. doi: 10.1242/dmm.049068. PubMed PMID: 34164643

JM Duringer, LL Blythe, CT Estill, A Moon, LD Murty, S Livesay, A Galen, AM Craig. (2021) Determination of a threshold for perennial ryegrass (Lolium perenne) toxicosis in cattle consuming endophyte-infected perennial ryegrass straw over 64 days. Livestock Science 250: 104570. DOI: 10.1016/j.livsci.2021.104570

JM Duringer, R Mazumder, V Palmer, AM Craig, P Spencer. (2021) Case-Control Study of Nodding Syndrome in Acholiland: UrinaryMulti-Mycotoxin Screening. Toxins 13(5). DOI: 10.3390/toxins13050313. PMID: 33925470

O'Donnell EF 3rd, Jang HS, Liefwalker DF, Kerkvliet NI, Kolluri SK. Discovery and Mechanistic Characterization of a Select Modulator of AhR-regulated Transcription (SMAhRT) with Anti-cancer Effects. Apoptosis. 2021 Jun;26(5-6):307-322. doi: 10.1007/s10495-021-01666-0.  PMID: 33893898.

Ye Q, Mohamed R, Dukhlallah D, Gencheva M, Hu G, Pearce MC, Kolluri SK, Marsh CB, Eubank TD, Ivanov AV, Guo NL. Molecular Analysis of ZNF71 KRAB in Non-Small-Cell Lung Cancer. Int J Mol Sci. 2021 Apr 4;22(7):3752. doi: 10.3390/ijms22073752. PMID: 33916522.

Vermillion Maier ML, Siddens LK, Uesugi SL, Choi J, Leonard SW, Pennington JM, Tilton SC, Smith JN, Ho E, Chow HHS, Nguyen BD, Kolluri SK, Williams DE. 3,3'-Diindolylmethane (BioResponse DIM®) Exhibits Significant Metabolism Following Oral Dosing in Humans. Drug Metab Dispos. 2021 May 25:DMD-AR-2020-000346. doi: 10.1124/dmd.120.000346. PMID: 34035125.

MAY 2021

Dylan J. Wallis, Lisa Truong, Jane La Du, Robyn L. Tanguay, David M. Reif. Uncovering Evidence for Endocrine-disrupting Chemicals that Elicit Differential Susceptibility through Gene-Environment Interactions. In Press Toxics.

Chen J, Li J, Jiang H, Yu J, Wang H, Wang N, Chen S, Mo W, Wang P, Tanguay RL, Dong Q, Huang C. Developmental co-exposure of TBBPA and titanium dioxide nanoparticle induced behavioral deficits in larval zebrafish. Ecotoxicol Environ Saf. 2021;215:112176. doi: 10.1016/j.ecoenv.2021.112176. PubMed PMID: 33780780

APRIL 2021

Jiani Li, Hao Jiang, Jiajian Yu, Hongzhu Wang, Nengzhuang Wang, Shan Chen, Wen Mo, Ping Wang, Robyn L Tanguay, qiaoxiang dong, and Changjiang Huang. Developmental co-exposure of TBBPA and titanium dioxide nanoparticle induced behavioral deficits in larval zebrafish in press Ecotoxicology and Environmental Safety. https://doi.org/10.1016/j.ecoenv.2021.112176

John Gamble, Daniel Elson, Juliet Greenwood, Robyn Tanguay, Siva K. Kolluri. The Zebrafish Xenograft models for investigating cancer and cancer therapeutics.  In Press Biology. https://doi.org/10.3390/biology10040252

Chang Y, Huynh CT, Bastin KM, Rivera BN, Siddens LK, Tilton SC.  2020. Classifying polycyclic aromatic hydrocarbons by carcinogenic potency using in vitro biosignatures. In Vitro Toxicology. 69:104991. DOI: 10.1016/j.tiv.2020.104991

MARCH 2021

Lidberg KA, Annalora AJ, Jozic M, Elson DJ, Wang L, Bammler TK, Ramm S, Monteiro MB, Himmelfarb J, Marcus CB, Iversen PL, Kelly EJ. Antisense oligonucleotide development for the selective modulation of CYP3A5 in renal disease. Sci Rep. 2021 Feb 25;11(1):4722. doi: 10.1038/s41598-021-84194-w. PMID: 33633318.Jiani Li, Hao Jiang, Jiajian Yu, Hongzhu Wang, Nengzhuang Wang, Shan Chen, Wen Mo, Ping Wang, Robyn L Tanguay, qiaoxiang dong, and Changjiang Huang. Developmental co-exposure of TBBPA and titanium dioxide nanoparticle induced behavioral deficits in larval zebrafish in press Ecotoxicology and Environmental Safety. https://doi.org/10.1016/j.ecoenv.2021.112176

Ghetu, C.C, Scott, R.P, Wilson, G. et al. Improvements in identification and quantitation of alkylated PAHs and forensic ratio sourcing. Anal Bioanal Chem (2021). https://doi.org/10.1007/s00216-020-03127-0

Kahalehili HM, Newman NK, Pennington JM, Kolluri SK, Kerkvliet NI, Shulzhenko, N, Morgun A, Ehrlich AK. Dietary Indole-3-Carbinol Activates AhR in the Gut, Alters Th17-Microbe Interactions, and Exacerbates Insulitis in NOD Mice. Front. Immunol. 21 January 2021. https://doi.org/10.3389/fimmu.2020.606441

FEBRUARY 2021

Shankar P, Dashner-Titus EJ, Truong L, Hayward K, Hudson LG, Tanguay RL. Developmental toxicity in zebrafish (Danio rerio) exposed to uranium: A comparison with lead, cadmium, and iron. Environ Pollut. 2021;269:116097. doi: 10.1016/j.envpol.2020.116097. PubMed PMID: 33246768; PMCID: PMC7785642. https://pubmed.ncbi.nlm.nih.gov/33246768/

To KT, St Mary L, Wooley AH, Wilbanks MS, Bednar AJ, Perkins EJ, Truong L, Tanguay RL, Garcia-Reyero N. Morphological and Behavioral Effects in Zebrafish Embryos after Exposure to Smoke Dyes. Toxics. 2021;9(1). doi: 10.3390/toxics9010009. PubMed PMID: 33435144. https://pubmed.ncbi.nlm.nih.gov/33435144/

Zhang J, Head B, Leonard SW, Choi J, Tanguay RL, Traber MG. Vitamin E deficiency dysregulates thiols, amino acids and related molecules during zebrafish embryogenesis. Redox Biol. 2021;38:101784. Epub 2020/11/14. doi: 10.1016/j.redox.2020.101784. PubMed PMID: 33186843; PMCID: PMC7658488. https://pubmed.ncbi.nlm.nih.gov/33186843/

DECEMBER 2020

Jeremiah K. S. Dung, Jennifer M. Duringer, Navneet Kaur, Jeness C. Scott, Kenneth Frost, Darrin L. Walenta, Steve Alderman, A. Morrie Craig, and Philip Hamm. Molecular and alkaloid characterization of Claviceps purpurea sensu lato from grass seed production areas of the U.S. Pacific Northwest. Phytopathology. Published Online: 3 Nov 2020 https://doi.org/10.1094/PHYTO-07-20-0289-R

J.M. Duringer, H.L. Roberts, B. Doupovec, J. Faas, C.T. Estill, D. Jiang, D. Schatzmayr. Effects of deoxynivalenol and fumonisins fed in combination on beef cattle: health and performance indices. World Mycotoxin Journal 13(4), pp. 533–543. DOI: https://doi.org/10.3920/WMJ2020.2567

Prarthana Shankar, Erica J. Dashner-Titus, Lisa Truong, Kimberly Hayward, Laurie G. Hudson, and Robyn L. Tanguay. Developmental Toxicity of Zebrafish (Danio rerio) Exposed to Uranium: A Comparison with Lead, Cadmium, and Iron. In Press Environmental Pollution. Cross-center publication Univ. New Mexico and our Center.

Gaulke, C. A., Beaver, L. M., Armour, C. R., Humphreys, I. R., Barton, C. L., Tanguay, R. L., Ho, E., & Sharpton, T. J. (2020). An integrated gene catalog of the zebrafish gut microbiome reveals significant homology with mammalian microbiomes. bioRxiv, 2020.2006.2015.153924.

NOVEMBER 2020

Lindsay B. Wilson, Lisa Truong, Michael T. Simonich and Robyn L. Tanguay. Systematic Assessment of Exposure Variations on Observed Bioactivity in Zebrafish Chemical Screening.  Toxics 2020, 8(4), 87; https://doi.org/10.3390/toxics8040087 (registering DOI) - 14 Oct 2020

Gaulke, C. A., Beaver, L. M., Armour, C. R., Humphreys, I. R., Barton, C. L., Tanguay, R. L., Ho, E., & Sharpton, T. J. (2020). An integrated gene catalog of the zebrafish gut microbiome reveals significant homology with mammalian microbiomes. bioRxiv, 2020.2006.2015.153924.

OCTOBER 2020

Brian Head, Jane La Du, Robyn L. Tanguay, Chrissa Kioussi and Maret G. Traber. Vitamin E is necessary for zebrafish nervous system development. Scientific Reports. https://rdcu.be/b7uM9

Prarthana Shankar, Subham Dasgupta, Mark E. Hahn, and Robyn L. Tanguay. A Review of the Functional Roles of the Zebrafish Aryl Hydrocarbon Receptors. In Press Toxicological Sciences

Melissa Haendel (contributing author.) Modelling kidney disease using ontology: insights from the Kidney Precision Medicine Project, Nature Reviews Nephrology (2020). https://www.nature.com/articles/s41581-020-00335-w

Melissa Haendel, Julie McMurry (contributing authors). The case for open science: rare diseases, JAMIA Open, ooaa030, https://doi.org/10.1093/jamiaopen/ooaa030

Melissa Haendel, Julie McMurry (contributing authors). Interpretable Clinical Genomics with a Likelihood Ratio Paradigm,  American Society of Human Genetics. https://www.cell.com/ajhg/fulltext/S0002-9297(20)30230-5

SEPTEMBER 2020

N Kaur, WR Cooper, JM Duringer, A Rashed, I Badillo-Vargas, G Esparza-Díaz, DR Horton. (2020) Mortality of potato psyllid (Hemiptera:Triozidae) on host clippings inoculated with ergot alkaloids. Journal of Economic Entomology. DOI: 10.1093/jee/toaa144 PMID: 32651952

Melissa Haendel has co-authored an article appearing in the Yearbook of Medical Informatics 2020, entitled “Ontologies, Knowledge Representation, and Machine Learning for Translational Research: Recent Contributions”.

Melissa Haendel has co-authored an article appearing in Issue 11 of Journal of Biomedical Semantics, entitled “Structuring, reuse and analysis of electronic dental data using the Oral Health and Disease Ontology”.

The multi-dimensional embryonic zebrafish platform predicts flame retardant bioactivity Lisa Truong, Skylar Marvel, David M. Reif, Dennis Thomas, Paritosh Pande, Subham Dasgupta, Michael T. Simonich, Katrina M. Waters, and Robyn L. Tanguay. Reproductive Toxicology. https://www.sciencedirect.com/science/article/pii/S0890623820301969

AUGUST 2020

Shelton DS, Shelton SG, Daniel DK, Raja M, Bhat A, Tanguay RL, Higgs DM, Martins EP.  Collective Behavior in Wild Zebrafish. Zebrafish. 2020. doi: 10.1089/zeb.2019.1851. PubMed PMID: 32513074

Subham Dasgupta, Guangxin Wang, Michael T. Simonich, Tingwei Zhang, Lisa Truong, Huaping Liu, and Robyn L. Tanguay. Impacts of high dose 3.5 GHz cellphone radiofrequency on zebrafish embryonic development. In Press Plos One.

JULY 2020

Michael A Garland, Mitra C Geier, Sean M Bugel, Prarthana Shankar, Cheryl L Dunham, Joseph M Brown, Susan C Tilton, Robyn L Tanguay.  Aryl hydrocarbon receptor mediates larval zebrafish fin duplication following exposure to benzofluoranthenes. ToxSci. https://academic.oup.com/toxsci/article-abstract/176/1/46/5834730

Qiaosen Shen, Lisa Truong, Michael T. Simonich, Changjiang Huang, Robyn L. Tanguay and Qiaoxiang Dong. Rapid well-plate assays for motor and social behaviors in larval zebrafish Behavioural Brain Research. https://www.sciencedirect.com/science/article/pii/S0166432820303247

APRIL 2020

Alternative Splicing in the Nuclear Receptor Superfamily Expands Gene Function to Refine Endo-Xenobiotic Metabolism. Andrew J. Annalora, Craig B. Marcus and Patrick L. Iversen; Drug Metabolism and Dispositon April 2020, 48 (4) 272-287; DOI: https://doi.org/10.1124/dmd.119.089102, https://dmd.aspetjournals.org/content/48/4/272

Li C, Barton C, Henke K, Daane J, Treaster S, Caetano-Lopes J, Tanguay RL, Harris MP. celsr1a is essential for tissue homeostasis and onset of aging phenotypes in the zebrafish. Elife. 2020;9. doi: 10.7554/eLife.50523. PubMed PMID: 31985398; PMCID: PMC701040

McLaughlin MC, Blotevogel J, Watson RA, Schell B, Blewett TA, Folkerts EJ, Goss GG, Truong L, Tanguay RL, Argueso JL, Borch T. Mutagenicity assessment downstream of oil and gas produced water discharges intended for agricultural beneficial reuse. Sci Total Environ. 2020;715:136944. doi: 10.1016/j.scitotenv.2020.136944. PubMed PMID: 32014773.

Roper, C., Perez, A., Barrett, D., Hystad, P., Massey Simonich, S.L., Tanguay,R.L., Workflow for comparison of chemical and biological metrics of filter collected PM2.5, AtmosphericEnvironment (2020), doi: https://doi.org/10.1016/j.atmosenv.2020.117379.

Junyan Tao, Chenglian Bai, Yuanhong Chen, Huanhuan Zhou, Yahui Liu, Qingyu Shi, Wenhao Pan, Haojia Dong, Luyi Li, Hui Xu, Robyn Tanguay, Changjiang Huang, Qiaoxiang Dong, Environmental relevant concentrations of benzophenone-3 induced developmental neurotoxicity in zebrafish, Science of The Total Environment.