College of Agricultural Sciences

K. J. Vining, Pomraning, K. R., Wilhelm, L. J., Ma, C., Pellegrini, M., Di, Y., Mockler, T. C., Freitag, M., and Strauss, S. H., “Methylome reorganization during in vitro dedifferentiation and regeneration of Populus trichocarpa”, BMC Plant Biology, vol. 13, no. 1, p. 92, 2013.

K. J. Vining and Davis, T., “Isolation of a Ve homolog, mVe1, and its relationship to verticillium wilt resistance in Mentha longifolia (L.) Huds”, Molecular Genetics and Genomics, vol. 28, no. 29, pp. 173 - 184, 2009.

S. Naithani, Gupta, P., Preece, J., Garg, P., Fraser, V., Padgitt-Cobb, L. K., Martin, M., Vining, K., and Jaiswal, P., “Involving community in genes and pathway curation.”, Database : the journal of biological databases and curation, vol. 2019, 2019.

G. T. Slavov, DiFazio, S. P., Martin, J., Schackwitz, W., Muchero, W., Rodgers-Melnick, E., Lipphardt, M. F., Pennacchio, C. P., Hellsten, U., Pennacchio, L. A., Gunter, L. E., Ranjan, P., Vining, K. J., Pomraning, K. R., Wilhelm, L. J., Pellegrini, M., Mockler, T. C., Freitag, M., Geraldes, A., El-Kassaby, Y. A., Mansfield, S. D., Cronk, Q. C. B., Douglas, C. J., Strauss, S. H., Rokhsar, D., and Tuskan, G. A., “Genome resequencing reveals multiscale geographic structure and extensive linkage disequilibrium in the forest tree Populus trichocarpa”, New Phytologist, vol. 19, no. 3, pp. 713 - 725, 2012.

A. A. Myburg, Grattapaglia, D., Tuskan, G. A., Hellsten, U., Hayes, R. D., Grimwood, J., Jenkins, J., Lindquist, E., Tice, H., Bauer, D., Goodstein, D. M., Dubchak, I., Poliakov, A., Mizrachi, E., Kullan, A. R. K., Hussey, S. G., Pinard, D., van der Merwe, K., Singh, P., van Jaarsveld, I., Silva-Junior, O. B., Togawa, R. C., Pappas, M. R., Faria, D. A., Sansaloni, C. P., Petroli, C. D., Yang, X., Ranjan, P., Tschaplinski, T. J., Ye, C. - Y., Li, T., Sterck, L., Vanneste, K., Murat, F., Soler, çal, San Clemente, élène, Saidi, N., Cassan-Wang, H., Dunand, C., Hefer, C. A., Bornberg-Bauer, E., Kersting, A. R., Vining, K. J., Amarasinghe, V., Ranik, M., Naithani, S., Elser, J., Boyd, A. E., Liston, A., Spatafora, J. W., Dharmwardhana, P., Raja, R., Sullivan, C., Romanel, E., Alves-Ferreira, M., ülheim, C., Foley, W., Carocha, V., Paiva, J., Kudrna, D., Brommonschenkel, S. H., Pasquali, G., Byrne, M., Rigault, P., Tibbits, J., Spokevicius, A., Jones, R. C., Steane, D. A., Vaillancourt, éE., Potts, B. M., Joubert, F., Barry, K., Pappas, G. J., Strauss, S. H., Jaiswal, P., Grima-Pettenati, J., Salse, érôme, Van de Peer, Y., Rokhsar, D. S., and Schmutz, J., “The genome of Eucalyptus grandis”, Nature, vol. 51, no. 75, pp. 356 - 362, 2014.

A. A. Myburg, Grattapaglia, D., Tuskan, G. A., Hellsten, U., Hayes, R. D., Grimwood, J., Jenkins, J., Lindquist, E., Tice, H., Bauer, D., Goodstein, D. M., Dubchak, I., Poliakov, A., Mizrachi, E., Kullan, A. R. K., Hussey, S. G., Pinard, D., van der Merwe, K., Singh, P., van Jaarsveld, I., Silva-Junior, O. B., Togawa, R. C., Pappas, M. R., Faria, D. A., Sansaloni, C. P., Petroli, C. D., Yang, X., Ranjan, P., Tschaplinski, T. J., Ye, C. - Y., Li, T., Sterck, L., Vanneste, K., Murat, F., Soler, M., San Clemente, H., Saidi, N., Cassan-Wang, H., Dunand, C., Hefer, C. A., Bornberg-Bauer, E., Kersting, A. R., Vining, K., Amarasinghe, V., Ranik, M., Naithani, S., Elser, J., Boyd, A. E., Liston, A., Spatafora, J. W., Dharmwardhana, P., Raja, R., Sullivan, C., Romanel, E., Alves-Ferreira, M., Külheim, C., Foley, W., Carocha, V., Paiva, J., Kudrna, D., Brommonschenkel, S. H., Pasquali, G., Byrne, M., Rigault, P., Tibbits, J., Spokevicius, A., Jones, R. C., Steane, D. A., Vaillancourt, R. E., Potts, B. M., Joubert, F., Barry, K., Pappas, G. J., Strauss, S. H., Jaiswal, P., Grima-Pettenati, J., Salse, J., Van de Peer, Y., Rokhsar, D. S., and Schmutz, J., “The genome of Eucalyptus grandis.”, Nature, vol. 510, pp. 356-62, 2014.

K. J. Vining, Contreras, R., Ranik, M., and Strauss, S. H., “Genetic methods for mitigating invasiveness of woody ornamental plants: Research needs and opportunities.”, HortScience, vol. 47, no. 9, 2012.

K. J. Vining, Romanel, E., Jones, R. C., Klocko, A., Alves-Ferreira, M., Hefer, C. A., Amarasinghe, V., Dharmawardhana, P., Naithani, S., Ranik, M., Wesley-Smith, J., Solomon, L., Jaiswal, P., Myburg, A. A., and Strauss, S. H., “The floral transcriptome of Eucalyptus grandis”, New Phytologist, vol. 20, no. 4, pp. 1406 - 1422, 2015.

K. J. Vining, Pomraning, K. R., Wilhelm, L. J., Priest, H. D., Pellegrini, M., Mockler, T. C., Freitag, M., and Strauss, S. H., “Dynamic DNA cytosine methylation in the Populus trichocarpa genome: tissue-level variation and relationship to gene expression”, BMC Genomics, vol. 13, no. 1, p. 27, 2012.

D. Bryant, Bushakra, J. M., Dossett, M., Vining, K. J., Filichkin, S., Weiland, J., Lee, J., Finn, C. E., Bassil, N., and Mockler, T., “Building the genomic infrastructure in black raspberry”, HortScience, 2014.