College of Agricultural Sciences

M. Bionaz and Loor, J. J., “ACSL1, AGPAT6, FABP3, LPIN1, and SLC27A6 are the most abundant isoforms in bovine mammary tissue and their expression is affected by stage of lactation.”, J Nutr, vol. 138, no. 6, pp. 1019-24, 2008.

D. E. Graugnard, Piantoni, P., Bionaz, M., Berger, L. L., Faulkner, D. B., and Loor, J. J., “Adipogenic and energy metabolism gene networks in longissimus lumborum during rapid post-weaning growth in Angus and Angus x Simmental cattle fed high-starch or low-starch diets.”, BMC Genomics, vol. 10, p. 142, 2009.

E. A. Andreasen, Mathew, L. K., Löhr, C. V., Hasson, R., and Tanguay, R. L., “Aryl hydrocarbon receptor activation impairs extracellular matrix remodeling during zebra fish fin regeneration.”, Toxicol Sci, vol. 95, no. 1, pp. 215-26, 2007.

F. Stormshak, “Biochemical and endocrine aspects of oxytocin production by the mammalian corpus luteum.”, Reprod Biol Endocrinol, vol. 1, p. 92, 2003.

S. C. Tilton, Tal, T. L., Scroggins, S. M., Franzosa, J. A., Peterson, E. S., Tanguay, R. L., and Waters, K. M., “Bioinformatics Resource Manager v2.3: an integrated software environment for systems biology with microRNA and cross-species analysis tools.”, BMC Bioinformatics, vol. 13, p. 311, 2012.

Y. Yamazaki and Jaiswal, P., “Biological ontologies in rice databases. An introduction to the activities in Gramene and Oryzabase.”, Plant & cell physiology, vol. 46, pp. 63-8, 2005.

J. S. Osorio, Lohakare, J., and Bionaz, M., “Biosynthesis of milk fat, protein, and lactose: roles of transcriptional and posttranscriptional regulation.”, Physiol Genomics, vol. 48, no. 4, pp. 231-56, 2016.

F. Stormshak and Bishop, C., “Board-invited review: Estrogen and progesterone signaling: genomic and nongenomic actions in domestic ruminants.”, J Anim Sci, vol. 86, no. 2, pp. 299-315, 2008.

T. M. Hazzard, Christenson, L. K., and Stouffer, R. L., “Changes in expression of vascular endothelial growth factor and angiopoietin-1 and -2 in the macaque corpus luteum during the menstrual cycle.”, Mol Hum Reprod, vol. 6, no. 11, pp. 993-8, 2000.

M. Bionaz, Baumrucker, C. R., Shirk, E., Heuvel, J. P. Vanden, Block, E., and Varga, G. A., “Characterization of Madin-Darby bovine kidney cell line for peroxisome proliferator-activated receptors: temporal response and sensitivity to fatty acids.”, J Dairy Sci, vol. 91, no. 7, pp. 2808-13, 2008.

H. Kang, Lee, C. Hyung, Kim, J. Rhan, Kwon, J. Yeon, Seo, S. Gwon, Han, J. Gab, Kim, B. Gon, Kim, J. - E., and Lee, K. Won, “Chlorella vulgaris Attenuates Dermatophagoides Farinae-Induced Atopic Dermatitis-Like Symptoms in NC/Nga Mice.”, Int J Mol Sci, vol. 16, no. 9, pp. 21021-34, 2015.

S. M. Bugel, Bonventre, J. A., White, L. A., Tanguay, R. L., and Cooper, K. R., “Chronic exposure of killifish to a highly polluted environment desensitizes estrogen-responsive reproductive and biomarker genes.”, Aquat Toxicol, vol. 152, pp. 222-31, 2014.

A. C Quandt, Di, Y., Elser, J., Jaiswal, P., and Spatafora, J. W., “Differential Expression of Genes Involved in Host Recognition, Attachment, and Degradation in the Mycoparasite Tolypocladium ophioglossoides.”, G3 (Bethesda, Md.), vol. 6, pp. 731-41, 2016.

N. B. Litherland, Bionaz, M., Wallace, R. L., Loor, J. J., and Drackley, J. K., “Effects of the peroxisome proliferator-activated receptor-alpha agonists clofibrate and fish oil on hepatic fatty acid metabolism in weaned dairy calves.”, J Dairy Sci, vol. 93, no. 6, pp. 2404-18, 2010.

V. V. Peremyslov, Mockler, T. C., Filichkin, S. A., Fox, S. E., Jaiswal, P., Makarova, K. S., Koonin, E. V., and Dolja, V. V., “Expression, splicing, and evolution of the myosin gene family in plants.”, Plant physiology, vol. 155, pp. 1191-204, 2011.

M. Bionaz, Thering, B. J., and Loor, J. J., “Fine metabolic regulation in ruminants via nutrient-gene interactions: saturated long-chain fatty acids increase expression of genes involved in lipid metabolism and immune response partly through PPAR-α activation.”, Br J Nutr, vol. 107, no. 2, pp. 179-91, 2012.

C. Y. Usenko, Harper, S. L., and Tanguay, R. L., “Fullerene C60 exposure elicits an oxidative stress response in embryonic zebrafish.”, Toxicol Appl Pharmacol, vol. 229, no. 1, pp. 44-55, 2008.

P. Piantoni, Bionaz, M., Graugnard, D. E., Daniels, K. M., Akers, M., and Loor, J. J., “Gene expression ratio stability evaluation in prepubertal bovine mammary tissue from calves fed different milk replacers reveals novel internal controls for quantitative polymerase chain reaction.”, J Nutr, vol. 138, no. 6, pp. 1158-64, 2008.

M. Bionaz and Loor, J. J., “Gene networks driving bovine milk fat synthesis during the lactation cycle.”, BMC Genomics, vol. 9, p. 366, 2008.

L. Yee Cheong, Suk, S., Thimmegowda, N. R., Chung, M. - Y., Yang, H., Seo, S. Gwon, Shwetha, B., Kim, J. - E., Kwon, J. Yeon, Kim, B. Yeon, and Lee, K. Won, “Hirsutenone Directly Targets PI3K and ERK to Inhibit Adipogenesis in 3T3-L1 Preadipocytes.”, J Cell Biochem, vol. 116, no. 7, pp. 1361-70, 2015.

Y. Li, Ross-Viola, J. S., Shay, N. F., Moore, D. D., and Ricketts, M. - L., “Human CYP3A4 and murine Cyp3A11 are regulated by equol and genistein via the pregnane X receptor in a species-specific manner.”, J Nutr, vol. 139, no. 5, pp. 898-904, 2009.

S. Tramontana, Bionaz, M., Sharma, A., Graugnard, D. E., Cutler, E. A., Ajmone-Marsan, P., Hurley, W. L., and Loor, J. J., “Internal controls for quantitative polymerase chain reaction of swine mammary glands during pregnancy and lactation.”, J Dairy Sci, vol. 91, no. 8, pp. 3057-66, 2008.

J. Azevedo, Courtois, F., Hakimi, M. - A., Demarsy, E., Lagrange, T., Alcaraz, J. - P., Jaiswal, P., Maréchal-Drouard, L., and Lerbs-Mache, S., “Intraplastidial trafficking of a phage-type RNA polymerase is mediated by a thylakoid RING-H2 protein.”, Proceedings of the National Academy of Sciences of the United States of America, vol. 105, pp. 9123-8, 2008.

B. J. Thering, Bionaz, M., and Loor, J. J., “Long-chain fatty acid effects on peroxisome proliferator-activated receptor-alpha-regulated genes in Madin-Darby bovine kidney cells: optimization of culture conditions using palmitate.”, J Dairy Sci, vol. 92, no. 5, pp. 2027-37, 2009.

T. L. Tal and Tanguay, R. L., “Non-coding RNAs--novel targets in neurotoxicity.”, Neurotoxicology, vol. 33, no. 3, pp. 530-44, 2012.