College of Agricultural Sciences

M. Bionaz, Hurley, W., and Loor, J., Milk ProteinMilk Protein Synthesis in the Lactating Mammary Gland: Insights from Transcriptomics Analyses. InTech, 2012.

F. Rosa, Osorio, J. S., Trevisi, E., Yanqui-Rivera, F., Estill, C. T., and Bionaz, M., “2,4-Thiazolidinedione Treatment Improves the Innate Immune Response in Dairy Goats with Induced Subclinical Mastitis”, PPAR Research, vol. 2017378, no. 7, pp. 1 - 22, 2017.

H. ütling, Bionaz, M., Sloboda, D. M., Ehrlich, L., Henrich, W., Plagemann, A., and Braun, T., “Antenatal glucocorticoid treatment – Validation of internal reference genes in the human placenta”, Placenta, vol. 36, no. 9, p. A18, 2015.

J. S. Osorio, Lohakare, J., and Bionaz, M., “Biosynthesis of milk fat, protein, and lactose: roles of transcriptional and posttranscriptional regulation”, Physiological Genomics, vol. 4834138131121071241364010137134340134201380531635459226823392, no. 4, pp. 231 - 256, 2016.

H. Xu, Bionaz, M., Sloboda, D. M., Ehrlich, L., Li, S., Newnham, J. P., Dudenhausen, J. W., Henrich, W., Plagemann, A., Challis, J., and Braun, T., “The dilution effect and the importance of selecting the right internal control genes for RT-qPCR: a paradigmatic approach in fetal sheep”, BMC Research Notes, vol. 8, no. 1, p. 58, 2015.

M. F. Jiang, Lee, J. Nam, Bionaz, M., Deng, X. Yu, and Wang, Y., “Evaluation of Suitable Internal Control Genes for RT-qPCR in Yak Mammary Tissue during the Lactation Cycle”, PLOS ONE, vol. 11345296415633755299197101419512995, no. 14438112696, p. e0147705, 2016.

M. Bionaz, Thering, B. J., and Loor, J. J., “Fine metabolic regulation in ruminants via nutrient–gene interactions: saturated long-chain fatty acids increase expression of genes involved in lipid metabolism and immune response partly through PPAR-α activation”, British Journal of Nutrition, vol. 107180158177119161441771135, no. 02, pp. 179 - 191, 2012.

M. Bionaz, Chen, S., Khan, M. J., and Loor, J. J., “Functional Role of PPARs in Ruminants: Potential Targets for Fine-Tuning Metabolism during Growth and Lactation”, PPAR Research, vol. 20132339714020548138479266338428909095887199279385947129614157683277896210385421762899113416947828743436877, no. 11158263615235266873163231111641110104497, pp. 1 - 28, 2013.

M. Bionaz and Loor, J. J., “Gene Networks Driving Bovine Mammary Protein Synthesis during the Lactation cycle”, Bioinformatics and Biology Insights, vol. 5, p. BBI.S7003, 2011.

K. Shahzad, Bionaz, M., Trevisi, E., Bertoni, G., Rodriguez-Zas, S. L., and Loor, J. J., “Integrative Analyses of Hepatic Differentially Expressed Genes and Blood Biomarkers during the Peripartal Period between Dairy Cows Overfed or Restricted-Fed Energy Prepartum”, PLoS ONE, vol. , no. 6, p. e99757, 2014.

E. Monaco, de Lima, A. Sobreira, Bionaz, M., Maki, A., Wilson, S. M., Hurley, W. L., and Wheeler, M. B., “Morphological and Transcriptomic Comparison of Adipose and Bone Marrow Derived Porcine Stem Cells”, The Open Tissue Engineering and Regenerative Medicine Journal, vol. 2, no. 1, pp. 20 - 33, 2009.

M. Bionaz, Periasamy, K., Rodriguez-Zas, S. L., Hurley, W. L., and Loor, J. J., “A Novel Dynamic Impact Approach (DIA) for Functional Analysis of Time-Course Omics Studies: Validation Using the Bovine Mammary Transcriptome”, PLoS ONE, vol. 7372681757413986403624401594491129854186802816371674480Reprod847621151459289827657022)73, no. 3, p. e32455, 2012.

M. Bionaz, “Nutrigenomics Approaches to Fine-Tune Metabolism and Milk Production: Is This the Future of Ruminant Nutrition?”, Advances in Dairy Research, vol. 02, no. 01, 2014.

M. Bionaz, Periasamy, K., Rodriguez-Zas, S. L., Everts, R. E., Lewin, H. A., Hurley, W. L., and Loor, J. J., “Old and New Stories: Revelations from Functional Analysis of the Bovine Mammary Transcriptome during the Lactation Cycle”, PLoS ONE, vol. 7468986159848425815212299748165756869117279269291189745981691773918481221462093912835223577613410165615187910803812216323057, no. 3, p. e33268, 2012.

M. Bionaz, Hausman, G. J., Loor, J. J., and Mandard, éphane, “Physiological and Nutritional Roles of PPAR across Species”, PPAR Research, vol. 20131402086, no. 514, pp. 1 - 3, 2013.

J. S. Osorio and Bionaz, M., “Plasmid transfection in bovine cells: Optimization using a realtime monitoring of green fluorescent protein and effect on gene reporter assay”, Gene, vol. 626, pp. 200 - 208, 2017.

M. Bionaz, Monaco, E., and Wheeler, M. B., “Transcription Adaptation during In Vitro Adipogenesis and Osteogenesis of Porcine Mesenchymal Stem Cells: Dynamics of Pathways, Biological Processes, Up-Stream Regulators, and Gene Networks”, PLOS ONE, p. e0137644, 2015.

D. Bu, Bionaz, M., Wang, M., and Nan, X., “Transcriptome difference and potential crosstalk between liver and mammary tissue in mid-lactation primiparous dairy cows”, PLOS ONE, no. 363734Suppl 1, p. e0173082, 2017.

E. Monaco, Bionaz, M., Rodriguez-Zas, S., Hurley, W. L., and Wheeler, M. B., “Transcriptomics Comparison between Porcine Adipose and Bone Marrow Mesenchymal Stem Cells during In Vitro Osteogenic and Adipogenic Differentiation”, PLoS ONE, no. 3, p. e32481, 2012.

S. Bollmann, Bu, D., Wang, J., and Bionaz, M., “Unmasking Upstream Gene Expression Regulators with miRNA-corrected mRNA Data”, Bioinformatics and Biology Insights, vol. 9S4, p. BBI.S29332, 2015.

M. Rubessa, Polkoff, K., Bionaz, M., Monaco, E., Milner, D. J., Holllister, S. J., Goldwasser, M. S., and Wheeler, M. B., “Use of Pig as a Model for Mesenchymal Stem Cell Therapies for Bone Regeneration”, Animal Biotechnology, vol. 281984112182052158431944, no. 41765143111, pp. 275 - 287, 2017.

M. Bionaz, “What Scientific Journals Can Do to Improve the Peer Review Process: Rewarding the Reviewer!”, Journal of Nutrition & Food Sciences, vol. 03, no. 04, 2013.