College of Agricultural Sciences

C. Hollatz, ÇA, S. I. B. E. L. L. E. T. O. R. R. E. S., REDONDO, R. O. D. R. I. G. O. A. F., MARMONTEL, Í. R. I. A. M., C. Baker, S., and Santos, ícioR., “The Amazon River system as an ecological barrier driving genetic differentiation of the pink dolphin (Inia geoffrensis)”, Biological Journal of the Linnean Society, vol. 102, no. 4, pp. 812 - 827, 2011.

T. Endo, Hisamichi, Y., Kimura, O., Haraguchi, K., and C. Baker, S., “Contamination levels of mercury and cadmium in melon-headed whales (Peponocephala electra) from a mass stranding on the Japanese coast”, Science of The Total Environment, vol. 401, no. 1-3, pp. 73 - 80, 2008.

L. G. Torres, Rayment, W., ía, C., Thompson, D. R., Graham, B., C. Baker, S., Patenaude, N., Bury, S. Jane, Boren, L. J., Parker, G., and Carroll, E. L., “Demography and ecology of southern right whales Eubalaena australis wintering at sub-Antarctic Campbell Island, New Zealand”, Polar Biology, vol. 40, no. 1, pp. 95 - 106, 2017.

R. M. Hamner, Pichler, F. B., Heimeier, D., Constantine, R., and C. Baker, S., “Genetic differentiation and limited gene flow among fragmented populations of New Zealand endemic Hector’s and Maui’s dolphins”, Conservation Genetics, vol. 13, no. 4, pp. 987 - 1002, 2012.

J. A. Jackson, Laikre, L., C. Baker, S., and Kendall, K. C., “Guidelines for collecting and maintaining archives for genetic monitoring”, Conservation Genetics Resources, vol. 4, no. 2, pp. 527 - 536, 2012.

K. F. Thompson, Patel, S., Williams, L., Tsai, P., Constantine, R., C. Baker, S., and Millar, C. D., “High coverage of the complete mitochondrial genome of the rare Gray’s beaked whale ( Mesoplodon grayi ) using Illumina next generation sequencing”, Mitochondrial DNA, vol. 27, no. 1, pp. 128 - 129, 2016.

J. A. Jackson, Patenaude, N. J., Carroll, E. L., and C. Baker, S., “How few whales were there after whaling? Inference from contemporary mtDNA diversity”, Molecular Ecology, vol. 17, no. 1, pp. 236 - 251, 2008.

J. Barlow, Calambokidis, J., Falcone, E. A., C. Baker, S., Burdin, A. M., Clapham, P. J., Ford, J. K. B., Gabriele, C. M., LeDuc, R., Mattila, D. K., Quinn, T. J., Rojas-Bracho, L., Straley, J. M., Taylor, B. L., R., Ján, Wade, P., Weller, D., Witteveen, B. H., and Yamaguchi, M., “Humpback whale abundance in the North Pacific estimated by photographic capture-recapture with bias correction from simulation studies”, Marine Mammal Science, vol. 27, no. 4, pp. 793 - 818, 2011.

D. M. Dick, Walbridge, S., Wright, D. J., Calambokidis, J., Falcone, E. A., Steel, D., Follett, T., Holmberg, J., and C. Baker, S., “geneGIS : Geoanalytical Tools and Arc Marine Customization for Individual-Based Genetic Records”, Transactions in GIS, vol. 18, no. 3, pp. 324 - 350, 2014.

S. Caballero, êne, S., Garavito, M. F., Slikas, B., and C. Baker, S., “Initial Evidence for Adaptive Selection on the NADH Subunit Two of Freshwater Dolphins by Analyses of Mitochondrial Genomes”, PLOS ONE, vol. 1031102484992689798465271623122121281489972042718751814611202333232714824194314762518518258430251515565375465642871837, no. 5, p. e0123543, 2015.

J. A. Jackson, Carroll, E. L., Smith, T. D., Zerbini, A. N., Patenaude, N. J., and C. Baker, S., “An integrated approach to historical population assessment of the great whales: case of the New Zealand southern right whale”, Royal Society Open Science, vol. 345142221021012133101312168985, no. 3, p. 150669, 2016.

K. Ruegg, Rosenbaum, H. C., Anderson, E. C., Engel, M., Rothschild, A., C. Baker, S., and Palumbi, S. R., “Long-term population size of the North Atlantic humpback whale within the context of worldwide population structure”, Conservation Genetics, vol. 14, no. 1, pp. 103 - 114, 2013.

íaJosé érez-Alvarez, ía, C., Moraga, R., C. Baker, S., Hamner, R. M., and Poulin, E., “Microsatellite Markers Reveal Strong Genetic Structure in the Endemic Chilean Dolphin”, PLOS ONE, vol. 10, no. 4, p. e0123956, 2015.

L. E. Pimper, C. Baker, S., R. Goodall, N. P., ía, C., and Remis, íaI., “Mitochondrial DNA variation and population structure of Commerson’s dolphins (Cephalorhynchus commersonii) in their southernmost distribution”, Conservation Genetics, vol. 11, no. 6, pp. 2157 - 2168, 2010.

S. Caballero, Jackson, J. A., Mignucci-Giannoni, A. A., Barrios-Garrido, éctor, án-Pedreros, S., Montiel-Villalobos, ı´aG., Robertson, K. M., and C. Baker, S., “Molecular systematics of South American dolphins Sotalia: Sister taxa determination and phylogenetic relationships, with insights into a multi-locus phylogeny of the Delphinidae”, Molecular Phylogenetics and Evolution, vol. 46, no. 1, pp. 252 - 268, 2008.

L. Laikre, ALLENDORF, F. R. E. D. W., ARONER, L. A. U. R. E. L. C., C. Baker, S., GREGOVICH, D. A. V. I. D. P., HANSEN, M. I. C. H. A. E. L. M., Jackson, J. A., Kendall, K. C., McKelvey, K., NEEL, M. A. I. L. E. C., OLIVIERI, I. S. A. B. E. L. L. E., RYMAN, N. I. L. S., SCHWARTZ, M. I. C. H. A. E. L. K., BULL, R. U. T. H. S. H. O. R. T., STETZ, J. E. F. F. R. E. Y. B., TALLMON, D. A. V. I. D. A., Taylor, B. L., VOJTA, C. H. R. I. S. T. I. N. A. D., WALLER, D. O. N. A. L. D. M., and WAPLES, R. O. B. I. N. S., “Neglect of Genetic Diversity in Implementation of the Convention on Biological Diversity”, Conservation Biology, vol. 24, no. 1, pp. 86 - 88, 2010.

M. Oremus, M. Poole, M., Albertson, G. R., and C. Baker, S., “Pelagic or insular? Genetic differentiation of rough-toothed dolphins in the Society Islands, French Polynesia”, Journal of Experimental Marine Biology and Ecology, vol. 432-433, pp. 37 - 46, 2012.

M. Dalebout, Steel, D., and C. Baker, S., “Phylogeny of the Beaked Whale Genus Mesoplodon (Ziphiidae: Cetacea) Revealed by Nuclear Introns: Implications for the Evolution of Male Tusks”, Systematic Biology, vol. 57, no. 6, pp. 857 - 875, 2008.

E. L. Carroll, Rayment, W. J., Alexander, A. M., C. Baker, S., Patenaude, N. J., Steel, D., Constantine, R., Cole, R., Boren, L. J., and Childerhouse, S., “Reestablishment of former wintering grounds by New Zealand southern right whales”, Marine Mammal Science, vol. 30, no. 1, pp. 206 - 220, 2014.

R. Constantine, Steel, D., Allen, J., Anderson, M., Andrews, O., C. Baker, S., Beeman, P., Burns, D., Charrassin, ît, Childerhouse, S., Double, M., Ensor, P., Franklin, T., Franklin, W., Gales, N., Garrigue, C., Gibbs, N., Harrison, P., Hauser, N., Hutsel, A., Jenner, C., Jenner, M. - N., Kaufman, G., Macie, A., Mattila, D., ía, C., Oosterman, A., Paton, D., M. Poole, M., Robbins, J., Schmitt, N. T., Stevick, P., Tagarino, A., Thompson, K. F., and Ward, J., “Remote Antarctic feeding ground important for east Australian humpback whales”, Marine Biology, vol. 161, no. 5, pp. 1087 - 1093, 2014.

N. Wiseman, Parsons, S., Stockin, K. A., and C. Baker, S., “Seasonal occurrence and distribution of Bryde's whales in the Hauraki Gulf, New Zealand”, Marine Mammal Science, vol. 27, no. 4, pp. E253 - E267, 2011.

T. Endo, Hotta, Y., Hisamichi, Y., Kimura, O., Sato, R., Haraguchi, K., Funahashi, N., and C. Baker, S., “Stable isotope ratios and mercury levels in red meat products from baleen whales sold in Japanese markets”, Ecotoxicology and Environmental Safety, vol. 79, pp. 35 - 41, 2012.

G. R. Albertson, Baird, R. W., Oremus, M., M. Poole, M., Martien, K. K., and C. Baker, S., “Staying close to home? Genetic differentiation of rough-toothed dolphins near oceanic islands in the central Pacific Ocean”, Conservation Genetics, 2016.

A. M. Alexander, Steel, D., Hoekzema, K., Mesnick, S. L., Engelhaupt, D., Kerr, I., Payne, R., and C. Baker, S., “What influences the worldwide genetic structure of sperm whales ( Physeter macrocephalus )?”, Molecular Ecology, vol. 25, no. 12, pp. 2754 - 2772, 2016.

K. F. Thompson, C. Baker, S., van Helden, A., Patel, S., Millar, C., and Constantine, R., “The world’s rarest whale”, Current Biology, vol. 22, no. 21, pp. R905 - R906, 2012.